Protein–RNA interactions for Protein: F6V5V4

Gm11397, Predicted gene 11397, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11397F6V5V4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.12■□□□□ 0.33
Gm11397F6V5V4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm11397F6V5V4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm11397F6V5V4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm11397F6V5V4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm11397F6V5V4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11397F6V5V4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.08■□□□□ 0.33
Gm11397F6V5V4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm11397F6V5V4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm11397F6V5V4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm11397F6V5V4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm11397F6V5V4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms