Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Syngap1F6SEU4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Syngap1F6SEU4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Mir5122-201ENSMUST00000175004 89 ntBASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Syngap1F6SEU4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.71■□□□□ 0.91
Syngap1F6SEU4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Gm15378-201ENSMUST00000121894 207 ntBASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Gm2559-201ENSMUST00000201323 363 ntBASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Syngap1F6SEU4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Gm5867-201ENSMUST00000063197 592 ntBASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Syngap1F6SEU4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Syngap1F6SEU4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Dio3-201ENSMUST00000097228 1449 ntBASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Syngap1F6SEU4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.66■□□□□ 0.9
Syngap1F6SEU4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Syngap1F6SEU4 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.65■□□□□ 0.9
Syngap1F6SEU4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Syngap1F6SEU4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Syngap1F6SEU4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syngap1F6SEU4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Syngap1F6SEU4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syngap1F6SEU4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Syngap1F6SEU4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Syngap1F6SEU4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.64■□□□□ 0.89
Syngap1F6SEU4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms