Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm13436-201ENSMUST00000120418 567 ntBASIC16.53■□□□□ 0.24
Shank1D3YZU1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Gm30025-201ENSMUST00000218555 728 ntBASIC16.53■□□□□ 0.24
Shank1D3YZU1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Gm13559-201ENSMUST00000120476 863 ntBASIC16.53■□□□□ 0.24
Shank1D3YZU1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.53■□□□□ 0.24
Shank1D3YZU1 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.53■□□□□ 0.24
Shank1D3YZU1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shank1D3YZU1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Gm18025-201ENSMUST00000221733 862 ntBASIC16.52■□□□□ 0.24
Shank1D3YZU1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shank1D3YZU1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Shank1D3YZU1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank1D3YZU1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shank1D3YZU1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.51■□□□□ 0.23
Shank1D3YZU1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.51■□□□□ 0.23
Shank1D3YZU1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shank1D3YZU1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Gm10517-202ENSMUST00000192970 758 ntBASIC16.5■□□□□ 0.23
Shank1D3YZU1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shank1D3YZU1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shank1D3YZU1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.48■□□□□ 0.23
Shank1D3YZU1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shank1D3YZU1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Gm3375-201ENSMUST00000203929 796 ntBASIC16.47■□□□□ 0.23
Shank1D3YZU1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shank1D3YZU1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms