Protein–RNA interactions for Protein: B1B1D3

Zfp40, Zinc finger protein 40, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp40B1B1D3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Zfp40B1B1D3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Gm11539-201ENSMUST00000119837 557 ntBASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Gm13436-201ENSMUST00000120418 567 ntBASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Zfp40B1B1D3 Gm7889-201ENSMUST00000185591 958 ntBASIC18.49■□□□□ 0.55
Zfp40B1B1D3 Gm21814-202ENSMUST00000203277 873 ntBASIC18.49■□□□□ 0.55
Zfp40B1B1D3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.49■□□□□ 0.55
Zfp40B1B1D3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.49■□□□□ 0.55
Zfp40B1B1D3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp40B1B1D3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp40B1B1D3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Zfp40B1B1D3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp40B1B1D3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp40B1B1D3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Zfp40B1B1D3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp40B1B1D3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Zfp40B1B1D3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Zfp40B1B1D3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Zfp40B1B1D3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Zfp40B1B1D3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Gm11927-201ENSMUST00000118472 759 ntBASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Zfp40B1B1D3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Zfp40B1B1D3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.44■□□□□ 0.54
Zfp40B1B1D3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms