Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm7417-201ENSMUST00000192950 473 ntBASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv20A0A0B4J1H5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv20A0A0B4J1H5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.53■□□□□ 0.24
Trbv20A0A0B4J1H5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbv20A0A0B4J1H5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trbv20A0A0B4J1H5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv20A0A0B4J1H5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms