Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13-4-dv7A0A075B6C2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.71□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13-4-dv7A0A075B6C2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms