Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav18A0A075B656 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.13■□□□□ 0.01
Trav18A0A075B656 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav18A0A075B656 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav18A0A075B656 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.12■□□□□ 0.01
Trav18A0A075B656 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav18A0A075B656 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav18A0A075B656 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav18A0A075B656 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.1■□□□□ 0.01
Trav18A0A075B656 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.1■□□□□ 0.01
Trav18A0A075B656 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav18A0A075B656 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav18A0A075B656 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.09■□□□□ 0.01
Trav18A0A075B656 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms