Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Gm3550W4VSN7 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Gm3550W4VSN7 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.21□□□□□ -1.41
Gm3550W4VSN7 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm22660-201ENSMUST00000104193 130 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm15422-201ENSMUST00000117453 541 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm14645-201ENSMUST00000118597 417 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 BC002163-201ENSMUST00000121906 319 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm24011-201ENSMUST00000157732 268 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm25164-201ENSMUST00000158908 116 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Mir8095-201ENSMUST00000185103 129 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm7891-201ENSMUST00000190284 843 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm23604-202ENSMUST00000198428 137 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm7542-201ENSMUST00000201140 777 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm5948-201ENSMUST00000219627 839 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm5316-201ENSMUST00000050391 270 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Mir24-2-201ENSMUST00000083607 107 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Gm3550W4VSN7 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm25273-201ENSMUST00000104295 115 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm15913-201ENSMUST00000118492 331 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm22342-201ENSMUST00000122647 298 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Mir6403-201ENSMUST00000185007 129 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm28728-201ENSMUST00000189087 405 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm18765-201ENSMUST00000203166 660 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm44833-201ENSMUST00000208368 331 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm45432-201ENSMUST00000210391 416 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 Gm2089-201ENSMUST00000218294 479 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 AC163041.1-201ENSMUST00000221984 133 ntBASIC6.2□□□□□ -1.42
Gm3550W4VSN7 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms