Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm42502-201ENSMUST00000198550 1089 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm43431-201ENSMUST00000198577 340 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm43810-201ENSMUST00000201018 232 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm19649-201ENSMUST00000201126 822 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm43967-201ENSMUST00000203787 301 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm44946-201ENSMUST00000208425 572 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm10046-202ENSMUST00000208942 126 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm45554-201ENSMUST00000210731 1004 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 AC133947.1-201ENSMUST00000213336 614 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 4930477N07Rik-201ENSMUST00000218762 614 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 AC155269.1-201ENSMUST00000220843 769 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 CT030657.4-201ENSMUST00000222177 744 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 AC156790.3-201ENSMUST00000226200 254 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 AC123692.1-201ENSMUST00000227514 730 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 4933436H12Rik-203ENSMUST00000207818 1466 ntTSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Il1f5-202ENSMUST00000114490 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Tex24-201ENSMUST00000095375 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Zfp939-201ENSMUST00000061201 2131 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Rps8-ps2-201ENSMUST00000118709 624 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm11357-201ENSMUST00000119758 954 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm14034-201ENSMUST00000120147 551 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm14438-201ENSMUST00000121572 624 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm12163-201ENSMUST00000121597 389 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm26991-201ENSMUST00000180950 620 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm2617-201ENSMUST00000185690 1066 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm17764-201ENSMUST00000185925 391 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm29651-201ENSMUST00000189088 697 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm29144-201ENSMUST00000189235 339 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm29238-201ENSMUST00000189709 695 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm28607-201ENSMUST00000190142 339 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm20802-201ENSMUST00000190832 698 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm28121-201ENSMUST00000191420 339 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm7733-201ENSMUST00000199038 919 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm38395-201ENSMUST00000199904 830 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm44018-201ENSMUST00000204471 407 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 AC211878.5-201ENSMUST00000221697 409 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 AC140406.3-201ENSMUST00000227619 478 ntBASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms