Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm6491-201ENSMUST00000118273 990 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm11926-201ENSMUST00000118520 430 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm8662-201ENSMUST00000118644 574 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm13252-201ENSMUST00000119355 321 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm22604-201ENSMUST00000157604 311 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm6100-201ENSMUST00000180253 403 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm29435-201ENSMUST00000191310 689 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm43226-201ENSMUST00000202438 259 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm19254-201ENSMUST00000204828 294 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm17995-201ENSMUST00000209266 530 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Smc1aQ9CU62 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm38147-201ENSMUST00000192397 1798 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm15153-201ENSMUST00000119867 274 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm7571-201ENSMUST00000120252 927 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm19161-201ENSMUST00000217958 737 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Smc1aQ9CU62 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm13255-201ENSMUST00000117255 547 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Gm11922-201ENSMUST00000118967 475 ntBASIC8.29□□□□□ -1.08
Smc1aQ9CU62 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms