Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm13423-201ENSMUST00000117205 888 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm13260-201ENSMUST00000117797 1264 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm14550-201ENSMUST00000117918 407 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm12477-201ENSMUST00000121221 571 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm13221-201ENSMUST00000121712 430 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm23139-201ENSMUST00000179454 132 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Mir6989-201ENSMUST00000184812 65 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm28117-201ENSMUST00000188472 371 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm28918-201ENSMUST00000188822 699 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm29605-201ENSMUST00000190800 292 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm38373-201ENSMUST00000192042 288 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm45259-201ENSMUST00000209217 1006 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 AC161275.1-201ENSMUST00000224668 208 ntBASIC9.45□□□□□ -0.9
RtcbQ99LF4 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC9.45□□□□□ -0.9
RtcbQ99LF4 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm6368-201ENSMUST00000119727 2147 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm38123-201ENSMUST00000194990 2779 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm11903-201ENSMUST00000118958 727 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm11338-201ENSMUST00000120086 1160 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm24382-201ENSMUST00000122698 107 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm14503-201ENSMUST00000130337 1164 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm22693-201ENSMUST00000175049 442 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm27039-201ENSMUST00000182438 962 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Mir8105-201ENSMUST00000184718 89 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm4525-201ENSMUST00000198831 254 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm43033-201ENSMUST00000199682 425 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm18690-201ENSMUST00000204488 985 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm4247-201ENSMUST00000211441 1042 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 AC158631.2-201ENSMUST00000219999 478 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 CT010480.3-201ENSMUST00000224712 259 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 CT030185.2-201ENSMUST00000222614 1310 ntBASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
RtcbQ99LF4 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms