Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm11855-201ENSMUST00000121562 1869 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm44584-201ENSMUST00000208395 2880 ntBASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Ccdc38Q8CDN8 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm12599-201ENSMUST00000120534 792 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm22562-201ENSMUST00000157334 111 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm26357-201ENSMUST00000158218 115 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm25164-201ENSMUST00000158908 116 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm24576-201ENSMUST00000175508 248 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm27542-201ENSMUST00000184184 256 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm20587-201ENSMUST00000186367 1186 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm2566-201ENSMUST00000201267 431 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 AC124183.1-201ENSMUST00000222367 2135 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Gm6729-201ENSMUST00000165173 1452 ntBASIC8.26□□□□□ -1.09
Ccdc38Q8CDN8 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm14380-201ENSMUST00000122298 431 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm25455-201ENSMUST00000157946 325 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm16184-201ENSMUST00000162324 573 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm5445-201ENSMUST00000180224 480 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm38164-201ENSMUST00000192810 330 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm6236-201ENSMUST00000193785 1009 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm45712-201ENSMUST00000212417 335 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm46379-201ENSMUST00000222551 265 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Mir135b-201ENSMUST00000083501 97 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.25□□□□□ -1.09
Ccdc38Q8CDN8 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc38Q8CDN8 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms