Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm6581-201ENSMUST00000214545 260 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.83□□□□□ -1
Atg4aQ8C9S8 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Atg4aQ8C9S8 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Grik1-209ENSMUST00000227986 2942 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm12459-201ENSMUST00000120659 356 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm14251-201ENSMUST00000122133 279 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm23657-201ENSMUST00000122623 294 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm4613-201ENSMUST00000165488 276 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Mir6357-201ENSMUST00000184246 104 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm5147-201ENSMUST00000185999 794 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm18699-201ENSMUST00000190713 243 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm5575-201ENSMUST00000190879 398 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm9723-201ENSMUST00000192100 457 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm6197-201ENSMUST00000192273 454 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm43812-202ENSMUST00000202701 581 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm5314-201ENSMUST00000204852 466 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.82□□□□□ -1
Atg4aQ8C9S8 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC8.82□□□□□ -1
Atg4aQ8C9S8 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm12306-201ENSMUST00000117256 171 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm15484-201ENSMUST00000118871 828 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm14202-201ENSMUST00000120121 311 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm27026-201ENSMUST00000183003 892 ntBASIC8.81□□□□□ -1
Atg4aQ8C9S8 Gm4785-201ENSMUST00000191025 751 ntBASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms