Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm45537-201ENSMUST00000211539 2708 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm26417-201ENSMUST00000104274 135 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm8662-201ENSMUST00000118644 574 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm12879-201ENSMUST00000120003 1182 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm11338-201ENSMUST00000120086 1160 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm12535-201ENSMUST00000121025 484 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm13221-201ENSMUST00000121712 430 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm16284-201ENSMUST00000140995 400 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm24057-201ENSMUST00000158616 302 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm43555-201ENSMUST00000196588 310 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm30646-201ENSMUST00000207662 180 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm2762-207ENSMUST00000202739 2665 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gm10307-201ENSMUST00000189839 1337 ntBASIC10.31□□□□□ -0.76
Usp47Q8BY87 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Usp47Q8BY87 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Usp47Q8BY87 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm13423-201ENSMUST00000117205 888 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm13940-201ENSMUST00000121023 301 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm22024-201ENSMUST00000122733 287 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm27185-201ENSMUST00000184296 247 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm7412-201ENSMUST00000191692 605 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm9419-201ENSMUST00000200672 567 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm44508-201ENSMUST00000206943 1157 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm7972-201ENSMUST00000208434 1137 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 AC131117.2-202ENSMUST00000224539 547 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Gm37984-201ENSMUST00000191641 3733 ntBASIC10.3□□□□□ -0.76
Usp47Q8BY87 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Usp47Q8BY87 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm37161-201ENSMUST00000191994 2697 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Usp47Q8BY87 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm12104-201ENSMUST00000120359 979 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm16027-201ENSMUST00000161618 758 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Mir7212-201ENSMUST00000184098 61 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm38022-201ENSMUST00000191762 403 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm34144-201ENSMUST00000197039 259 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm46424-201ENSMUST00000221567 168 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm23734-201ENSMUST00000083753 109 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm26575-201ENSMUST00000181714 2232 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Usp47Q8BY87 Gm44130-201ENSMUST00000205157 3004 ntBASIC10.29□□□□□ -0.76
Usp47Q8BY87 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms