Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Shmt1P50431 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Shmt1P50431 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Shmt1P50431 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Shmt1P50431 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.89□□□□□ -1.15
Shmt1P50431 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Shmt1P50431 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.89□□□□□ -1.15
Shmt1P50431 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Shmt1P50431 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Shmt1P50431 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.89□□□□□ -1.15
Shmt1P50431 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Shmt1P50431 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Shmt1P50431 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Shmt1P50431 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC7.88□□□□□ -1.15
Shmt1P50431 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Gm15644-201ENSMUST00000121764 387 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm27026-201ENSMUST00000183003 892 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Gm28983-201ENSMUST00000186685 614 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Gm28150-201ENSMUST00000187305 614 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Gm28377-201ENSMUST00000189695 720 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm37676-201ENSMUST00000195496 507 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm29759-201ENSMUST00000205860 327 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.88□□□□□ -1.15
Shmt1P50431 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Shmt1P50431 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Shmt1P50431 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.88□□□□□ -1.15
Shmt1P50431 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Shmt1P50431 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Shmt1P50431 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC7.87□□□□□ -1.15
Shmt1P50431 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC7.87□□□□□ -1.15
Shmt1P50431 Klf10-202ENSMUST00000226363 2917 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.87□□□□□ -1.15
Shmt1P50431 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Shmt1P50431 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Shmt1P50431 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Shmt1P50431 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Gm22709-201ENSMUST00000116893 111 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Gm9506-201ENSMUST00000118516 320 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm18352-201ENSMUST00000189113 902 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Shmt1P50431 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.87□□□□□ -1.15
Shmt1P50431 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 AC154692.1-202ENSMUST00000226632 1231 ntBASIC7.87□□□□□ -1.15
Shmt1P50431 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms