Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox6P40645 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.9□□□□□ -1.3
Sox6P40645 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm12955-201ENSMUST00000119689 957 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Gm15730-201ENSMUST00000121828 415 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox6P40645 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm37469-201ENSMUST00000193728 890 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm43815-201ENSMUST00000197676 990 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Gm26413-202ENSMUST00000198972 127 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Gm31579-201ENSMUST00000203306 966 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm32842-201ENSMUST00000212653 738 ntBASIC6.9□□□□□ -1.3
Sox6P40645 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.9□□□□□ -1.3
Sox6P40645 AC140208.1-201ENSMUST00000226609 285 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Sox6P40645 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Sox6P40645 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
Sox6P40645 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Sox6P40645 Gm5605-201ENSMUST00000208940 1305 ntBASIC6.9□□□□□ -1.3
Sox6P40645 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox6P40645 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox6P40645 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Sox6P40645 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Sox6P40645 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.9□□□□□ -1.31
Sox6P40645 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Sox6P40645 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sox6P40645 Gm24462-201ENSMUST00000102430 106 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Sox6P40645 Gm24195-201ENSMUST00000116804 137 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm12365-201ENSMUST00000117931 568 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.89□□□□□ -1.31
Sox6P40645 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC6.89□□□□□ -1.31
Sox6P40645 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC6.89□□□□□ -1.31
Sox6P40645 Mir1983-201ENSMUST00000157523 132 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm2951-201ENSMUST00000169447 490 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.89□□□□□ -1.31
Sox6P40645 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm9451-201ENSMUST00000188491 604 ntBASIC6.89□□□□□ -1.31
Sox6P40645 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox6P40645 Gm19035-202ENSMUST00000194575 959 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm44712-201ENSMUST00000206250 1076 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox6P40645 Gm30196-201ENSMUST00000208957 160 ntBASIC6.89□□□□□ -1.31
Sox6P40645 CT572999.1-201ENSMUST00000220315 1260 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox6P40645 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sox6P40645 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Gm7493-201ENSMUST00000085919 626 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox6P40645 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.89□□□□□ -1.31
Sox6P40645 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox6P40645 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms