Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Traf1P39428 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Traf1P39428 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Traf1P39428 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm11416-201ENSMUST00000119111 863 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm12844-201ENSMUST00000119463 582 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm11517-201ENSMUST00000119491 387 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm12634-201ENSMUST00000122157 992 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm9286-201ENSMUST00000173586 508 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm23187-201ENSMUST00000175746 86 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Mir8094-201ENSMUST00000183361 117 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm34583-203ENSMUST00000202586 454 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Gm45446-201ENSMUST00000209348 216 ntBASIC8.64□□□□□ -1.03
Traf1P39428 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.64□□□□□ -1.03
Traf1P39428 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Traf1P39428 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Traf1P39428 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.64□□□□□ -1.03
Traf1P39428 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Traf1P39428 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.63□□□□□ -1.03
Traf1P39428 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.63□□□□□ -1.03
Traf1P39428 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Traf1P39428 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Traf1P39428 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Traf1P39428 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Traf1P39428 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Traf1P39428 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.63□□□□□ -1.03
Traf1P39428 Gm11880-201ENSMUST00000117612 399 ntBASIC8.63□□□□□ -1.03
Traf1P39428 Gm11928-201ENSMUST00000119323 437 ntBASIC8.63□□□□□ -1.03
Traf1P39428 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.63□□□□□ -1.03
Traf1P39428 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.63□□□□□ -1.03
Traf1P39428 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.63□□□□□ -1.03
Traf1P39428 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.63□□□□□ -1.03
Traf1P39428 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Gm44590-201ENSMUST00000206161 391 ntBASIC8.63□□□□□ -1.03
Traf1P39428 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Traf1P39428 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.63□□□□□ -1.03
Traf1P39428 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.63□□□□□ -1.03
Traf1P39428 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Traf1P39428 Mir455-201ENSMUST00000093594 82 ntBASIC8.63□□□□□ -1.03
Traf1P39428 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Gm14849-201ENSMUST00000122293 2846 ntBASIC8.63□□□□□ -1.03
Traf1P39428 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Traf1P39428 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.63□□□□□ -1.03
Traf1P39428 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Traf1P39428 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Traf1P39428 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.62□□□□□ -1.03
Traf1P39428 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Traf1P39428 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Traf1P39428 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Traf1P39428 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
Traf1P39428 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms