Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm11558-201ENSMUST00000118454 459 ntBASIC6.53□□□□□ -1.36
P20040 Gm13552-201ENSMUST00000118837 417 ntBASIC6.53□□□□□ -1.36
P20040 Gm14824-201ENSMUST00000119421 737 ntBASIC6.53□□□□□ -1.36
P20040 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.53□□□□□ -1.36
P20040 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.53□□□□□ -1.36
P20040 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
P20040 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
P20040 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
P20040 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC6.53□□□□□ -1.36
P20040 Gm4545-201ENSMUST00000190797 603 ntBASIC6.53□□□□□ -1.36
P20040 Gm37977-201ENSMUST00000193096 721 ntBASIC6.53□□□□□ -1.36
P20040 Gm38305-201ENSMUST00000194825 223 ntBASIC6.53□□□□□ -1.36
P20040 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.53□□□□□ -1.36
P20040 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC6.53□□□□□ -1.36
P20040 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.53□□□□□ -1.36
P20040 Gm7542-201ENSMUST00000201140 777 ntBASIC6.53□□□□□ -1.36
P20040 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.53□□□□□ -1.36
P20040 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.53□□□□□ -1.36
P20040 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.53□□□□□ -1.36
P20040 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.53□□□□□ -1.36
P20040 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.53□□□□□ -1.36
P20040 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
P20040 Gm22865-201ENSMUST00000083949 214 ntBASIC6.53□□□□□ -1.36
P20040 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
P20040 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
P20040 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.53□□□□□ -1.36
P20040 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.53□□□□□ -1.36
P20040 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
P20040 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
P20040 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
P20040 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
P20040 Gm6350-201ENSMUST00000195099 1339 ntBASIC6.52□□□□□ -1.37
P20040 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.52□□□□□ -1.37
P20040 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC6.52□□□□□ -1.37
P20040 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
P20040 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
P20040 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
P20040 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
P20040 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.52□□□□□ -1.37
P20040 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.52□□□□□ -1.37
P20040 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.52□□□□□ -1.37
P20040 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm6746-201ENSMUST00000108774 483 ntBASIC6.52□□□□□ -1.37
P20040 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
P20040 Gm12024-201ENSMUST00000118819 1253 ntBASIC6.52□□□□□ -1.37
P20040 Gm15047-201ENSMUST00000118891 454 ntBASIC6.52□□□□□ -1.37
P20040 Gm14612-201ENSMUST00000121522 881 ntBASIC6.52□□□□□ -1.37
P20040 Gm14380-201ENSMUST00000122298 431 ntBASIC6.52□□□□□ -1.37
P20040 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC6.52□□□□□ -1.37
P20040 Gm4835-201ENSMUST00000155839 972 ntBASIC6.52□□□□□ -1.37
P20040 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.52□□□□□ -1.37
P20040 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm20430-201ENSMUST00000172474 207 ntBASIC6.52□□□□□ -1.37
P20040 Gm6838-201ENSMUST00000172851 582 ntBASIC6.52□□□□□ -1.37
P20040 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC6.52□□□□□ -1.37
P20040 Mir3078-201ENSMUST00000175231 87 ntBASIC6.52□□□□□ -1.37
P20040 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Mir7029-201ENSMUST00000184777 61 ntBASIC6.52□□□□□ -1.37
P20040 Gm6610-201ENSMUST00000186324 358 ntBASIC6.52□□□□□ -1.37
P20040 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.52□□□□□ -1.37
P20040 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm23011-202ENSMUST00000197855 275 ntBASIC6.52□□□□□ -1.37
P20040 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
P20040 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.52□□□□□ -1.37
P20040 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.52□□□□□ -1.37
P20040 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.52□□□□□ -1.37
P20040 Gm25852-201ENSMUST00000082790 130 ntBASIC6.52□□□□□ -1.37
P20040 Gm25926-201ENSMUST00000082899 160 ntBASIC6.52□□□□□ -1.37
P20040 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.52□□□□□ -1.37
P20040 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
P20040 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.52□□□□□ -1.37
P20040 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.52□□□□□ -1.37
P20040 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.52□□□□□ -1.37
P20040 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
P20040 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.52□□□□□ -1.37
P20040 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
P20040 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
P20040 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
P20040 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
P20040 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms