Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm29605-201ENSMUST00000190800 292 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm18593-201ENSMUST00000200754 1139 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm42883-201ENSMUST00000202594 222 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm44162-201ENSMUST00000203543 544 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm43926-201ENSMUST00000203978 430 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm6290-201ENSMUST00000207666 1158 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm45100-201ENSMUST00000209153 391 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm8489-201ENSMUST00000209876 1152 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 AC154562.1-201ENSMUST00000226140 966 ntBASIC9.32□□□□□ -0.92
NpcdF8VQB8 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
NpcdF8VQB8 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
NpcdF8VQB8 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm7562-201ENSMUST00000210502 2537 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Mir680-1-201ENSMUST00000102257 109 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm15933-201ENSMUST00000117215 616 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm13924-201ENSMUST00000119899 486 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm22408-201ENSMUST00000174925 65 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Mir8094-201ENSMUST00000183361 117 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm27602-201ENSMUST00000183861 111 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm27178-201ENSMUST00000184962 340 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 2610001J05Rik-204ENSMUST00000185361 767 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm7115-201ENSMUST00000193706 832 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm37526-201ENSMUST00000194640 619 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm18899-201ENSMUST00000217663 546 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 AC140368.1-202ENSMUST00000226131 658 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 AC124709.1-201ENSMUST00000227296 620 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 AC134335.1-201ENSMUST00000227626 329 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 AC154747.4-203ENSMUST00000225893 1384 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 AC122346.2-201ENSMUST00000224326 2931 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm38200-201ENSMUST00000192083 2111 ntBASIC9.31□□□□□ -0.92
NpcdF8VQB8 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC9.31□□□□□ -0.92
NpcdF8VQB8 Gm43623-201ENSMUST00000199289 2663 ntBASIC9.3□□□□□ -0.92
NpcdF8VQB8 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
NpcdF8VQB8 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.3□□□□□ -0.92
NpcdF8VQB8 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
NpcdF8VQB8 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
NpcdF8VQB8 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC9.3□□□□□ -0.92
NpcdF8VQB8 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
NpcdF8VQB8 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
NpcdF8VQB8 Gm44001-201ENSMUST00000203158 3773 ntBASIC9.3□□□□□ -0.92
NpcdF8VQB8 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 177.4 ms