Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Trdv2-1-201ENSMUST00000103677 345 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm14795-201ENSMUST00000118461 471 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm9392-201ENSMUST00000119337 554 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm12250-201ENSMUST00000119467 1274 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm11420-201ENSMUST00000120047 402 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm11404-201ENSMUST00000120872 494 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm16458-201ENSMUST00000121428 502 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm12989-201ENSMUST00000122331 731 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm15942-201ENSMUST00000136305 810 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 1700120E14Rik-201ENSMUST00000137034 732 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Mymk-202ENSMUST00000163967 1210 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Trp53-ps-201ENSMUST00000166597 141 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Mir3473c-201ENSMUST00000175262 81 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm29577-201ENSMUST00000186427 693 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm19124-201ENSMUST00000191041 832 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Trbv28-201ENSMUST00000192804 264 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm38063-201ENSMUST00000193990 342 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm44243-201ENSMUST00000204323 692 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm9305-201ENSMUST00000220962 599 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm46342-201ENSMUST00000223411 602 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 AC154738.2-201ENSMUST00000227403 1110 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 AC136376.1-201ENSMUST00000228496 950 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 AC165437.1-201ENSMUST00000228640 536 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm37222-201ENSMUST00000192806 2961 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.11□□□□□ -1.11
Trim42Q9D2H5 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim42Q9D2H5 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Cinp-202ENSMUST00000220607 1579 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm24142-201ENSMUST00000101960 107 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm13543-201ENSMUST00000121230 796 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm15727-201ENSMUST00000122416 437 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm18779-201ENSMUST00000173444 577 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm23563-201ENSMUST00000174900 251 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 2410021H03Rik-201ENSMUST00000187090 764 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm38145-201ENSMUST00000192319 693 ntBASIC8.1□□□□□ -1.11
Trim42Q9D2H5 Gm8896-201ENSMUST00000197434 1106 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms