Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm14380-201ENSMUST00000122298 431 ntBASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm26179-201ENSMUST00000177723 132 ntBASIC8.78□□□□□ -1
Vps54Q5SPW0 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm37295-201ENSMUST00000192186 109 ntBASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm18226-201ENSMUST00000215261 521 ntBASIC8.78□□□□□ -1
Vps54Q5SPW0 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm19217-201ENSMUST00000218238 328 ntBASIC8.78□□□□□ -1
Vps54Q5SPW0 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.78□□□□□ -1
Vps54Q5SPW0 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Vps54Q5SPW0 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Vps54Q5SPW0 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Vps54Q5SPW0 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.77□□□□□ -1
Vps54Q5SPW0 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.77□□□□□ -1
Vps54Q5SPW0 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Vps54Q5SPW0 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Vps54Q5SPW0 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.77□□□□□ -1
Vps54Q5SPW0 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm25757-201ENSMUST00000103986 123 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm15739-201ENSMUST00000118049 872 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm11343-201ENSMUST00000120579 599 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm3208-201ENSMUST00000168281 427 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Mir7005-201ENSMUST00000185089 69 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm18469-201ENSMUST00000208850 439 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps54Q5SPW0 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm15576-201ENSMUST00000117806 583 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm26729-201ENSMUST00000180744 352 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Pea15b-201ENSMUST00000182806 387 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm27684-201ENSMUST00000183778 80 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm37017-201ENSMUST00000195266 747 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm8539-201ENSMUST00000199822 501 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm5723-201ENSMUST00000203096 432 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.76□□□□□ -1.01
Vps54Q5SPW0 AV026068-219ENSMUST00000224148 933 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.76□□□□□ -1.01
Vps54Q5SPW0 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms