Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm24071-201ENSMUST00000104520 132 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm8084-201ENSMUST00000120807 752 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Mir3072-201ENSMUST00000175610 83 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Mir683-1-201ENSMUST00000179371 109 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm27972-201ENSMUST00000184720 137 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm37339-201ENSMUST00000194142 392 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm5307-201ENSMUST00000204772 760 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm45283-201ENSMUST00000210593 628 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm45925-202ENSMUST00000219904 1136 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Olfr890-201ENSMUST00000079804 945 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm24143-201ENSMUST00000082633 145 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.8□□□□□ -1.16
Trim43aQ3TL54 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim43aQ3TL54 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm25167-201ENSMUST00000104188 120 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm24334-201ENSMUST00000104210 128 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm5752-201ENSMUST00000117771 594 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm8644-201ENSMUST00000118619 596 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm11907-201ENSMUST00000118918 1007 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm5255-201ENSMUST00000120125 642 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm6428-201ENSMUST00000161062 345 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm26197-201ENSMUST00000175033 115 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm26729-201ENSMUST00000180744 352 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Mir6340-201ENSMUST00000183857 119 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm28546-201ENSMUST00000188221 615 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm18351-201ENSMUST00000188646 883 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm5251-201ENSMUST00000188959 472 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm43815-201ENSMUST00000197676 990 ntBASIC7.79□□□□□ -1.16
Trim43aQ3TL54 Gm26413-202ENSMUST00000198972 127 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 232 ms