Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC6.76□□□□□ -1.33
Col8a1Q00780 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 AC155298.3-201ENSMUST00000225307 3220 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm18594-201ENSMUST00000175733 1403 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Pi4kb-203ENSMUST00000125476 3400 ntTSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm13571-202ENSMUST00000151984 2127 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm26967-201ENSMUST00000182878 2303 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Vmn2r53-201ENSMUST00000170412 2421 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm22470-201ENSMUST00000104117 130 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm13735-201ENSMUST00000120217 670 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm12459-201ENSMUST00000120659 356 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm7746-201ENSMUST00000120966 503 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm26254-201ENSMUST00000122491 118 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm23116-201ENSMUST00000158481 67 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm2976-201ENSMUST00000160362 513 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm24362-201ENSMUST00000183220 416 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm20776-201ENSMUST00000189940 700 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm43478-201ENSMUST00000200381 292 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC6.76□□□□□ -1.33
Col8a1Q00780 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 AC144733.1-201ENSMUST00000222893 1289 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 AC171241.2-201ENSMUST00000228744 892 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm42497-201ENSMUST00000197363 1958 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm37066-201ENSMUST00000192713 2061 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Cyb5d2-203ENSMUST00000156294 2158 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm8728-201ENSMUST00000207367 2178 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm8486-201ENSMUST00000207508 2171 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm8685-201ENSMUST00000207567 2183 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm16443-201ENSMUST00000207909 2184 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 CT030170.4-201ENSMUST00000221539 1538 ntTSL 5 BASIC6.76□□□□□ -1.33
Col8a1Q00780 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col8a1Q00780 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC6.76□□□□□ -1.33
Col8a1Q00780 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Mterf4-203ENSMUST00000112944 3097 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Col8a1Q00780 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col8a1Q00780 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms