Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Rfx1P48377 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Rfx1P48377 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm14762-201ENSMUST00000105109 1771 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Grik1-209ENSMUST00000227986 2942 ntBASIC9.21□□□□□ -0.94
Rfx1P48377 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rfx1P48377 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rfx1P48377 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Rfx1P48377 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm11922-201ENSMUST00000118967 475 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Gm7212-201ENSMUST00000120817 348 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC9.2□□□□□ -0.94
Rfx1P48377 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm26371-201ENSMUST00000157829 104 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Gm4540-201ENSMUST00000170669 429 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm43690-201ENSMUST00000201213 266 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm19172-201ENSMUST00000203170 1246 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 AC153932.1-201ENSMUST00000218558 787 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Cacna2d3-208ENSMUST00000225985 918 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Diaph3-206ENSMUST00000226745 713 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm8394-201ENSMUST00000079684 952 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Gm16410-201ENSMUST00000094550 774 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Rfx1P48377 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.2□□□□□ -0.94
Rfx1P48377 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC9.2□□□□□ -0.94
Rfx1P48377 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rfx1P48377 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC9.2□□□□□ -0.94
Rfx1P48377 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC9.19□□□□□ -0.94
Rfx1P48377 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC9.19□□□□□ -0.94
Rfx1P48377 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC9.19□□□□□ -0.94
Rfx1P48377 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rfx1P48377 Gm28193-201ENSMUST00000189863 615 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Gm19214-201ENSMUST00000191956 1083 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Gm2566-201ENSMUST00000201267 431 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC9.19□□□□□ -0.94
Rfx1P48377 Gm29815-201ENSMUST00000202418 178 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Gm21048-201ENSMUST00000202470 1166 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC9.19□□□□□ -0.94
Rfx1P48377 Gm19228-201ENSMUST00000214030 717 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC9.19□□□□□ -0.94
Rfx1P48377 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rfx1P48377 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rfx1P48377 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rfx1P48377 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Rfx1P48377 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC9.19□□□□□ -0.94
Rfx1P48377 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC9.19□□□□□ -0.94
Rfx1P48377 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rfx1P48377 Gm6640-201ENSMUST00000120629 1587 ntBASIC9.19□□□□□ -0.94
Rfx1P48377 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms