Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm3810-201ENSMUST00000122413 476 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.51□□□□□ -1.21
HttP42859 Gm25459-201ENSMUST00000157953 114 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm20396-201ENSMUST00000173358 745 ntBASIC7.51□□□□□ -1.21
HttP42859 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HttP42859 Mir6903-201ENSMUST00000183597 88 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm44768-201ENSMUST00000205719 393 ntBASIC7.51□□□□□ -1.21
HttP42859 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.51□□□□□ -1.21
HttP42859 AC131029.1-201ENSMUST00000226391 2929 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm45532-201ENSMUST00000210342 3620 ntBASIC7.51□□□□□ -1.21
HttP42859 Gm43331-201ENSMUST00000197991 1689 ntBASIC7.51□□□□□ -1.21
HttP42859 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.51□□□□□ -1.21
HttP42859 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC7.51□□□□□ -1.21
HttP42859 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC7.51□□□□□ -1.21
HttP42859 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HttP42859 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Pcgf5-211ENSMUST00000225920 6443 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.5□□□□□ -1.21
HttP42859 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
HttP42859 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.5□□□□□ -1.21
HttP42859 Gm15242-201ENSMUST00000122459 283 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.5□□□□□ -1.21
HttP42859 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm28958-201ENSMUST00000185864 703 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.5□□□□□ -1.21
HttP42859 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.5□□□□□ -1.21
HttP42859 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
HttP42859 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.5□□□□□ -1.21
HttP42859 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.5□□□□□ -1.21
HttP42859 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Gm4773-201ENSMUST00000120392 702 ntBASIC7.5□□□□□ -1.21
HttP42859 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.5□□□□□ -1.21
HttP42859 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm8419-201ENSMUST00000189886 412 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm28467-201ENSMUST00000190981 318 ntBASIC7.5□□□□□ -1.21
HttP42859 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Gm44566-201ENSMUST00000207638 304 ntBASIC7.5□□□□□ -1.21
HttP42859 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Gm18592-201ENSMUST00000221529 276 ntBASIC7.5□□□□□ -1.21
HttP42859 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HttP42859 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.5□□□□□ -1.21
HttP42859 Gm4992-201ENSMUST00000120256 768 ntBASIC7.49□□□□□ -1.21
HttP42859 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.49□□□□□ -1.21
HttP42859 Gm29470-201ENSMUST00000188007 696 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm43141-201ENSMUST00000199695 274 ntBASIC7.49□□□□□ -1.21
HttP42859 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC7.49□□□□□ -1.21
HttP42859 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC7.49□□□□□ -1.21
HttP42859 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.49□□□□□ -1.21
HttP42859 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HttP42859 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC7.49□□□□□ -1.21
HttP42859 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.49□□□□□ -1.21
HttP42859 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Gm18980-201ENSMUST00000199098 1079 ntBASIC7.49□□□□□ -1.21
HttP42859 Gm43794-201ENSMUST00000200971 692 ntBASIC7.49□□□□□ -1.21
HttP42859 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
HttP42859 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HttP42859 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms