Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm10012-202ENSMUST00000170379 372 ntBASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Gm5973-201ENSMUST00000178542 496 ntBASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Gm27026-201ENSMUST00000183003 892 ntBASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.21□□□□□ -1.42
Usf3B2RUQ2 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.21□□□□□ -1.42
Usf3B2RUQ2 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Usf3B2RUQ2 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Usf3B2RUQ2 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm25757-201ENSMUST00000103986 123 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm9423-201ENSMUST00000183173 997 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Mir6409-201ENSMUST00000184957 92 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm43287-201ENSMUST00000197747 600 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm3549-201ENSMUST00000203873 794 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm9652-201ENSMUST00000209345 163 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 AC125539.1-201ENSMUST00000227423 622 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 AC123738.2-201ENSMUST00000223791 1899 ntBASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Usf3B2RUQ2 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm26016-201ENSMUST00000104403 129 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm14248-201ENSMUST00000117790 544 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm25180-201ENSMUST00000157746 115 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm29562-201ENSMUST00000190113 904 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm44931-201ENSMUST00000206056 545 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm25189-201ENSMUST00000083911 164 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Gm43331-201ENSMUST00000197991 1689 ntBASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Usf3B2RUQ2 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms