Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm9286-201ENSMUST00000173586 508 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Mir3078-201ENSMUST00000175231 87 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm6931-201ENSMUST00000183103 371 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm28428-201ENSMUST00000188886 697 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm38337-201ENSMUST00000193986 599 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Nup88Q8CEC0 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm5228-201ENSMUST00000117186 357 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm11895-201ENSMUST00000122165 467 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm6489-201ENSMUST00000178167 696 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm29240-201ENSMUST00000187248 286 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm8921-201ENSMUST00000204306 649 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm44487-201ENSMUST00000205145 325 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Nup88Q8CEC0 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.71□□□□□ -1.01
Nup88Q8CEC0 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Nup88Q8CEC0 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Nup88Q8CEC0 Gm37785-201ENSMUST00000195783 2408 ntBASIC8.71□□□□□ -1.01
Nup88Q8CEC0 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Nup88Q8CEC0 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC8.71□□□□□ -1.01
Nup88Q8CEC0 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm14480-201ENSMUST00000118521 433 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm13552-201ENSMUST00000118837 417 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm11416-201ENSMUST00000119111 863 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm26784-201ENSMUST00000181666 410 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm43542-201ENSMUST00000199505 379 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Nup88Q8CEC0 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms