Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Vcpip1Q8CDG3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm16221-201ENSMUST00000117331 393 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm26357-201ENSMUST00000158218 115 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm42424-201ENSMUST00000198319 376 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm20223-201ENSMUST00000199932 805 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Vcpip1Q8CDG3 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm6490-201ENSMUST00000111862 461 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm6754-201ENSMUST00000117124 913 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm15843-201ENSMUST00000146593 529 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm23117-201ENSMUST00000158482 108 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm6489-201ENSMUST00000178167 696 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm27782-201ENSMUST00000185059 199 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm18690-201ENSMUST00000204488 985 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm44979-201ENSMUST00000206218 287 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm45399-201ENSMUST00000209955 1016 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gm45925-202ENSMUST00000219904 1136 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 AC132446.1-201ENSMUST00000222655 226 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Vcpip1Q8CDG3 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms