Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 AC106830.2-201ENSMUST00000226624 943 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 AC121997.2-202ENSMUST00000227158 939 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm43331-201ENSMUST00000197991 1689 ntBASIC10.36□□□□□ -0.75
Usp47Q8BY87 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm11257-201ENSMUST00000121313 315 ntBASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm8357-201ENSMUST00000181115 1011 ntBASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm9114-201ENSMUST00000188558 997 ntBASIC10.36□□□□□ -0.75
Usp47Q8BY87 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 AC134913.1-201ENSMUST00000224563 504 ntBASIC10.36□□□□□ -0.75
Usp47Q8BY87 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm24411-201ENSMUST00000083428 131 ntBASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gm24924-201ENSMUST00000084007 164 ntBASIC10.36□□□□□ -0.75
Usp47Q8BY87 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Usp47Q8BY87 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gm44289-201ENSMUST00000204144 1390 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gm8421-201ENSMUST00000119439 305 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Mir1930-201ENSMUST00000158799 84 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gm19764-201ENSMUST00000203630 649 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gm44971-201ENSMUST00000206192 337 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 AC108947.1-201ENSMUST00000224274 1000 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gm42820-201ENSMUST00000200084 3063 ntBASIC10.35□□□□□ -0.75
Usp47Q8BY87 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Usp47Q8BY87 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Usp47Q8BY87 AC122426.2-201ENSMUST00000216522 2947 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm42597-201ENSMUST00000196663 1544 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm11342-203ENSMUST00000224879 1324 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Usp47Q8BY87 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Usp47Q8BY87 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Usp47Q8BY87 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Usp47Q8BY87 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm22707-201ENSMUST00000103834 110 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm6743-201ENSMUST00000117345 1066 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm13260-201ENSMUST00000117797 1264 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm23657-201ENSMUST00000122623 294 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm26323-201ENSMUST00000157743 175 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm16026-205ENSMUST00000162923 641 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Usp47Q8BY87 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm28952-201ENSMUST00000189285 681 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Gm44471-201ENSMUST00000197963 100 ntBASIC10.34□□□□□ -0.75
Usp47Q8BY87 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms