Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Cnot2-202ENSMUST00000105265 2268 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col8a1Q00780 Luzp4-202ENSMUST00000163338 2025 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.32
Col8a1Q00780 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col8a1Q00780 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col8a1Q00780 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC6.77□□□□□ -1.32
Col8a1Q00780 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Col8a1Q00780 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC6.77□□□□□ -1.32
Col8a1Q00780 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Col8a1Q00780 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm45292-201ENSMUST00000211232 2207 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 AC164978.1-201ENSMUST00000228608 4011 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 A930002I21Rik-201ENSMUST00000060946 1512 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm43942-201ENSMUST00000204522 2859 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Cd300ld-201ENSMUST00000045075 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm14036-201ENSMUST00000118248 480 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm15709-201ENSMUST00000118354 213 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm4918-201ENSMUST00000119420 1084 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm13444-201ENSMUST00000119445 522 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm11850-201ENSMUST00000119679 479 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm15057-201ENSMUST00000121516 534 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 D630024D03Rik-203ENSMUST00000134944 715 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm25837-201ENSMUST00000158919 108 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm2619-202ENSMUST00000166777 651 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28335-201ENSMUST00000186204 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28558-201ENSMUST00000187373 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28734-201ENSMUST00000188104 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28968-201ENSMUST00000190413 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm38229-201ENSMUST00000191931 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm38121-201ENSMUST00000193213 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm37991-201ENSMUST00000194297 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm38035-201ENSMUST00000194427 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm38350-201ENSMUST00000194789 696 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm42429-201ENSMUST00000198579 558 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm43708-201ENSMUST00000198857 961 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC6.77□□□□□ -1.33
Col8a1Q00780 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm6667-201ENSMUST00000217169 564 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 AC156952.1-201ENSMUST00000220361 793 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC6.77□□□□□ -1.33
Col8a1Q00780 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 AC108945.1-201ENSMUST00000226477 94 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm6887-201ENSMUST00000080945 482 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm3822-201ENSMUST00000201941 2935 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm31463-201ENSMUST00000208799 1479 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm8204-201ENSMUST00000185696 2144 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC6.77□□□□□ -1.33
Col8a1Q00780 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Pramef17-201ENSMUST00000105762 1753 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Col8a1Q00780 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col8a1Q00780 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms