Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.29□□□□□ -1.08
Rrp1P56183 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rrp1P56183 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rrp1P56183 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rrp1P56183 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.29□□□□□ -1.08
Rrp1P56183 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Rrp1P56183 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Gm13929-201ENSMUST00000117553 1125 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Gm13006-201ENSMUST00000118683 214 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Gm12632-201ENSMUST00000121223 495 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Gm15079-201ENSMUST00000121943 216 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Gm25845-201ENSMUST00000122588 310 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm23164-201ENSMUST00000175084 111 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Gm25947-201ENSMUST00000180343 110 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm43725-201ENSMUST00000200122 369 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rrp1P56183 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Rrp1P56183 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Rrp1P56183 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Rrp1P56183 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.28□□□□□ -1.08
Rrp1P56183 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.27□□□□□ -1.08
Rrp1P56183 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.27□□□□□ -1.08
Rrp1P56183 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rrp1P56183 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Phf7-206ENSMUST00000228437 1373 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Rrp1P56183 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm7831-201ENSMUST00000117990 552 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm15836-201ENSMUST00000119952 793 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm11809-201ENSMUST00000120923 950 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm16407-201ENSMUST00000122134 567 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm17129-201ENSMUST00000168168 505 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm26197-201ENSMUST00000175033 115 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm27542-201ENSMUST00000184184 256 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.27□□□□□ -1.09
Rrp1P56183 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm44192-201ENSMUST00000204195 556 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm44982-201ENSMUST00000208795 471 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.27□□□□□ -1.09
Rrp1P56183 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Gm7986-201ENSMUST00000221336 551 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 AC131586.4-201ENSMUST00000228424 668 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Rrp1P56183 Gm2531-201ENSMUST00000075609 512 ntBASIC8.27□□□□□ -1.09
Rrp1P56183 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rrp1P56183 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Rrp1P56183 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rrp1P56183 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms