Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm15928-201ENSMUST00000122455 280 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.36□□□□□ -1.23
Fdft1P53798 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm25437-201ENSMUST00000158282 132 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Gm24883-201ENSMUST00000158391 281 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm28546-201ENSMUST00000188221 615 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.36□□□□□ -1.23
Fdft1P53798 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.36□□□□□ -1.23
Fdft1P53798 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.36□□□□□ -1.23
Fdft1P53798 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Gm30196-201ENSMUST00000208957 160 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm25926-201ENSMUST00000082899 160 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.36□□□□□ -1.23
Fdft1P53798 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.36□□□□□ -1.23
Fdft1P53798 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Fdft1P53798 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Fdft1P53798 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
Fdft1P53798 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Fdft1P53798 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Fdft1P53798 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Fdft1P53798 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.36□□□□□ -1.23
Fdft1P53798 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Fdft1P53798 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Fdft1P53798 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Fdft1P53798 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.35□□□□□ -1.23
Fdft1P53798 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 Mir669e-201ENSMUST00000117003 119 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 Gm12593-201ENSMUST00000120981 743 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm20702-201ENSMUST00000176181 460 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm28239-201ENSMUST00000190225 447 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 Gm26413-202ENSMUST00000198972 127 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 AC131586.4-201ENSMUST00000228424 668 ntBASIC7.35□□□□□ -1.23
Fdft1P53798 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.35□□□□□ -1.23
Fdft1P53798 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Fdft1P53798 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
Fdft1P53798 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Fdft1P53798 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Fdft1P53798 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
Fdft1P53798 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
Fdft1P53798 Malat1-201ENSMUST00000172812 6983 ntBASIC7.34□□□□□ -1.23
Fdft1P53798 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Fdft1P53798 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.34□□□□□ -1.23
Fdft1P53798 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Fdft1P53798 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.34□□□□□ -1.23
Fdft1P53798 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Fdft1P53798 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.34□□□□□ -1.23
Fdft1P53798 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Fdft1P53798 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Fdft1P53798 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms