Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm37120-201ENSMUST00000193350 5959 ntBASIC11.27□□□□□ -0.61
Cux1P53564 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cux1P53564 Ephx2-202ENSMUST00000224698 1985 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC11.26□□□□□ -0.61
Cux1P53564 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cux1P53564 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cux1P53564 Gm22426-201ENSMUST00000103811 96 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Gm12573-201ENSMUST00000118158 286 ntBASIC11.26□□□□□ -0.61
Cux1P53564 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cux1P53564 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cux1P53564 Gm4202-201ENSMUST00000169025 733 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC11.26□□□□□ -0.61
Cux1P53564 Gm42752-201ENSMUST00000198394 1106 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Gm2221-201ENSMUST00000209342 418 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC11.26□□□□□ -0.61
Cux1P53564 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC11.26□□□□□ -0.61
Cux1P53564 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cux1P53564 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cux1P53564 AC164295.1-201ENSMUST00000224861 186 ntBASIC11.26□□□□□ -0.61
Cux1P53564 AC133203.1-201ENSMUST00000228241 301 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Gm20302-201ENSMUST00000080671 275 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cux1P53564 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cux1P53564 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cux1P53564 Gm36401-201ENSMUST00000194255 2028 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cux1P53564 Rnf19a-203ENSMUST00000228358 3452 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC11.26□□□□□ -0.61
Cux1P53564 Gm38262-201ENSMUST00000194760 1382 ntBASIC11.26□□□□□ -0.61
Cux1P53564 AC154270.2-201ENSMUST00000226755 2306 ntBASIC11.26□□□□□ -0.61
Cux1P53564 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cux1P53564 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cux1P53564 Mir674-201ENSMUST00000102421 100 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Gm12402-201ENSMUST00000120536 334 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Gm12804-201ENSMUST00000121030 999 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Gm4886-201ENSMUST00000121874 1176 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Gm37295-201ENSMUST00000192186 109 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Gm8924-201ENSMUST00000197405 1132 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC11.25□□□□□ -0.61
Cux1P53564 Gm21040-201ENSMUST00000199493 1132 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cux1P53564 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC11.25□□□□□ -0.61
Cux1P53564 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC11.25□□□□□ -0.61
Cux1P53564 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Gm45887-201ENSMUST00000212672 2998 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cux1P53564 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Gm37139-201ENSMUST00000192134 4419 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Xpo7-206ENSMUST00000228346 4491 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC11.25□□□□□ -0.61
Cux1P53564 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC11.25□□□□□ -0.61
Cux1P53564 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC11.25□□□□□ -0.61
Cux1P53564 Gm13196-201ENSMUST00000118297 379 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Mir1900-201ENSMUST00000122714 78 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC11.25□□□□□ -0.61
Cux1P53564 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC11.25□□□□□ -0.61
Cux1P53564 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cux1P53564 Gm2754-201ENSMUST00000223383 589 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cux1P53564 Gm24924-201ENSMUST00000084007 164 ntBASIC11.25□□□□□ -0.61
Cux1P53564 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Gm37962-201ENSMUST00000195535 2034 ntBASIC11.24□□□□□ -0.61
Cux1P53564 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 AC105958.1-201ENSMUST00000214783 2144 ntBASIC11.24□□□□□ -0.61
Cux1P53564 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC11.24□□□□□ -0.61
Cux1P53564 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Cux1P53564 Gm37084-201ENSMUST00000191688 5898 ntBASIC11.24□□□□□ -0.61
Cux1P53564 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Cux1P53564 Gm5843-201ENSMUST00000121631 476 ntBASIC11.24□□□□□ -0.61
Cux1P53564 Mir1932-201ENSMUST00000157390 90 ntBASIC11.24□□□□□ -0.61
Cux1P53564 Gm7019-201ENSMUST00000194122 369 ntBASIC11.24□□□□□ -0.61
Cux1P53564 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Cux1P53564 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC11.24□□□□□ -0.61
Cux1P53564 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Gm6679-201ENSMUST00000191467 1869 ntBASIC11.23□□□□□ -0.61
Cux1P53564 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC11.23□□□□□ -0.61
Cux1P53564 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cux1P53564 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms