Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 AC153143.1-201ENSMUST00000222966 1340 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Hmgb3O54879 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.97□□□□□ -1.45
Hmgb3O54879 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.97□□□□□ -1.45
Hmgb3O54879 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC5.96□□□□□ -1.45
Hmgb3O54879 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Hmgb3O54879 Gm7701-201ENSMUST00000163185 1479 ntBASIC5.96□□□□□ -1.45
Hmgb3O54879 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Hmgb3O54879 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Hmgb3O54879 Gm43279-201ENSMUST00000202376 2512 ntBASIC5.96□□□□□ -1.45
Hmgb3O54879 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Hmgb3O54879 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Hmgb3O54879 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Hmgb3O54879 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm8818-201ENSMUST00000110797 1047 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm11241-201ENSMUST00000117371 896 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm15000-201ENSMUST00000118275 1243 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm5883-201ENSMUST00000120735 495 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm22424-201ENSMUST00000158527 87 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Mir3100-201ENSMUST00000174918 65 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Zfp572-202ENSMUST00000184208 1078 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Olfr1392-201ENSMUST00000189851 1018 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm44471-201ENSMUST00000197963 100 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm18690-201ENSMUST00000204488 985 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm45889-201ENSMUST00000209535 1057 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm8171-201ENSMUST00000217443 720 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm29783-201ENSMUST00000219398 369 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm3379-201ENSMUST00000222259 642 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 AC163038.1-201ENSMUST00000223632 1142 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm7086-202ENSMUST00000228849 506 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm25259-201ENSMUST00000083048 193 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC5.96□□□□□ -1.46
Hmgb3O54879 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Hmgb3O54879 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm12021-201ENSMUST00000121061 1746 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Hmgb3O54879 Gm20768-201ENSMUST00000199527 2338 ntBASIC5.96□□□□□ -1.46
Hmgb3O54879 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm24472-201ENSMUST00000104484 132 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm15355-201ENSMUST00000118929 285 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm6292-201ENSMUST00000120712 1095 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm23164-201ENSMUST00000175084 111 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm8524-201ENSMUST00000186232 379 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Hmgb3O54879 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC5.95□□□□□ -1.46
Hmgb3O54879 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Hmgb3O54879 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms