Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm24462-201ENSMUST00000102430 106 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm11558-201ENSMUST00000118454 459 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm13552-201ENSMUST00000118837 417 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm5761-201ENSMUST00000119238 834 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm13988-201ENSMUST00000119363 288 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm24647-201ENSMUST00000157112 113 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm23222-201ENSMUST00000158117 76 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Mir8095-201ENSMUST00000185103 129 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm37977-201ENSMUST00000193096 721 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm8925-201ENSMUST00000197212 763 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm44833-201ENSMUST00000208368 331 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm7392-201ENSMUST00000217815 345 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 AC157571.1-201ENSMUST00000222014 520 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 AC154649.2-201ENSMUST00000228189 808 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
Trim3Q9R1R2 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.28
Trim3Q9R1R2 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm24195-201ENSMUST00000116804 137 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm24130-201ENSMUST00000158536 151 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm10012-202ENSMUST00000170379 372 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm7542-201ENSMUST00000201140 777 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm29977-201ENSMUST00000206804 724 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm45399-201ENSMUST00000209955 1016 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm7151-201ENSMUST00000211511 954 ntBASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Trim3Q9R1R2 Gm28649-201ENSMUST00000189153 1581 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms