Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ube3bQ9ES34 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ube3bQ9ES34 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm15484-201ENSMUST00000118871 828 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm12864-201ENSMUST00000122207 1006 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm23441-201ENSMUST00000157268 127 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm24994-201ENSMUST00000157414 121 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm22600-201ENSMUST00000157598 269 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm26197-201ENSMUST00000175033 115 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm6750-201ENSMUST00000189273 268 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm19124-201ENSMUST00000191041 832 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm37710-201ENSMUST00000193501 1274 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm18747-201ENSMUST00000198129 648 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Amd-ps5-201ENSMUST00000198406 989 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm43772-201ENSMUST00000202052 379 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm44865-201ENSMUST00000207240 531 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm44743-201ENSMUST00000209062 386 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 CT030182.3-201ENSMUST00000225986 582 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 AC102139.1-201ENSMUST00000227000 251 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 AC170188.1-201ENSMUST00000223710 1963 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm42721-201ENSMUST00000197165 1523 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 AC139754.3-201ENSMUST00000220444 1627 ntBASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ube3bQ9ES34 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Dgkg-202ENSMUST00000089925 3555 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm12834-201ENSMUST00000121855 2829 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Cblb-205ENSMUST00000227756 3378 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm13742-201ENSMUST00000118805 457 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm13466-201ENSMUST00000121515 999 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm14048-201ENSMUST00000121864 1268 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm14651-201ENSMUST00000147192 442 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm26408-201ENSMUST00000157672 127 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm17097-201ENSMUST00000166414 714 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm21758-201ENSMUST00000179336 819 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm7481-201ENSMUST00000182020 995 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm29647-201ENSMUST00000188795 666 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm28504-201ENSMUST00000190977 666 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm31511-201ENSMUST00000193134 657 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm35843-201ENSMUST00000193716 666 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm7663-201ENSMUST00000201151 1240 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm31520-201ENSMUST00000203048 733 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm44726-201ENSMUST00000203427 217 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm45712-201ENSMUST00000212417 335 ntBASIC9.7□□□□□ -0.86
Ube3bQ9ES34 Gm17875-201ENSMUST00000216005 941 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms