Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Ccdc60Q8C4J0 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm8624-201ENSMUST00000118083 432 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm14787-201ENSMUST00000121236 388 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm4785-201ENSMUST00000191025 751 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm36928-201ENSMUST00000192466 694 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm37325-201ENSMUST00000194971 694 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm43108-201ENSMUST00000200525 293 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm44380-201ENSMUST00000203125 293 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm44931-201ENSMUST00000206056 545 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm44508-201ENSMUST00000206943 1157 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 CT025639.2-201ENSMUST00000224440 1220 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 AC154747.4-201ENSMUST00000224802 903 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Gm38262-201ENSMUST00000194760 1382 ntBASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Ccdc60Q8C4J0 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm22882-201ENSMUST00000157749 124 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm21430-201ENSMUST00000182998 998 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Mir7011-201ENSMUST00000183768 73 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm28416-201ENSMUST00000188334 292 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 AC161877.2-201ENSMUST00000226248 545 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Ccdc60Q8C4J0 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.92
Ccdc60Q8C4J0 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Ccdc60Q8C4J0 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Gm6786-201ENSMUST00000203165 1915 ntBASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Ccdc60Q8C4J0 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms