Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.59□□□□□ -1.2
Trub1Q8C0D0 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.59□□□□□ -1.2
Trub1Q8C0D0 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm43681-201ENSMUST00000201581 1903 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm23701-201ENSMUST00000103893 110 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm22152-201ENSMUST00000116966 125 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm11688-201ENSMUST00000122145 308 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Trub1Q8C0D0 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.58□□□□□ -1.2
Trub1Q8C0D0 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm13545-201ENSMUST00000119044 482 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm15644-201ENSMUST00000121764 387 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm2735-201ENSMUST00000136133 277 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm27218-201ENSMUST00000183745 392 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm38337-201ENSMUST00000193986 599 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trub1Q8C0D0 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.57□□□□□ -1.2
Trub1Q8C0D0 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Trub1Q8C0D0 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms