Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 CT573019.1-201ENSMUST00000227762 1689 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm45737-201ENSMUST00000208344 1612 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm25631-201ENSMUST00000104390 130 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm15188-201ENSMUST00000121264 704 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm5261-201ENSMUST00000185860 713 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm42804-201ENSMUST00000199701 178 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm19007-201ENSMUST00000217746 874 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm36758-201ENSMUST00000222594 310 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 AC154361.1-201ENSMUST00000225694 745 ntBASIC10.39□□□□□ -0.75
Usp47Q8BY87 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Usp47Q8BY87 Gm43679-201ENSMUST00000197051 3677 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm37410-201ENSMUST00000193623 3039 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm14631-201ENSMUST00000119067 594 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm12321-201ENSMUST00000121485 804 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm23018-201ENSMUST00000177928 109 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm29354-201ENSMUST00000187613 696 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm38373-201ENSMUST00000192042 288 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Ighv1-73-201ENSMUST00000197435 352 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm43656-201ENSMUST00000197882 434 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm8058-201ENSMUST00000217247 587 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 AC124510.2-201ENSMUST00000221958 683 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 AC157572.1-201ENSMUST00000227187 825 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Gm37496-201ENSMUST00000191930 2509 ntBASIC10.38□□□□□ -0.75
Usp47Q8BY87 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Usp47Q8BY87 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm15903-202ENSMUST00000199631 3518 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm37520-201ENSMUST00000194883 2672 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm13313-201ENSMUST00000118938 1084 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm12710-201ENSMUST00000119011 216 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm12944-201ENSMUST00000119262 463 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm14380-201ENSMUST00000122298 431 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm16357-201ENSMUST00000144091 474 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm8715-201ENSMUST00000162728 531 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm7651-201ENSMUST00000173398 901 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm20690-201ENSMUST00000177341 315 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm17786-201ENSMUST00000182000 427 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm28070-201ENSMUST00000191502 445 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm8101-201ENSMUST00000192796 478 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm43595-201ENSMUST00000196464 1071 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm43147-201ENSMUST00000196944 542 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm17833-201ENSMUST00000197629 1065 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC10.37□□□□□ -0.75
Usp47Q8BY87 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC10.37□□□□□ -0.75
Usp47Q8BY87 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms