Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm19088-201ENSMUST00000198800 566 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Ckb-ps1-201ENSMUST00000199192 1127 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm8703-201ENSMUST00000203793 730 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm8168-201ENSMUST00000209631 948 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 AC133183.2-201ENSMUST00000221543 280 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 AC159203.1-201ENSMUST00000222039 769 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 AC121542.1-201ENSMUST00000227245 721 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Dlg2-202ENSMUST00000098308 2329 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm43414-201ENSMUST00000197710 3188 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.79□□□□□ -1.32
Col8a1Q00780 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Gm9903-201ENSMUST00000181102 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col8a1Q00780 Ctdsp2-201ENSMUST00000105255 4136 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Idh3g-201ENSMUST00000052761 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm22022-201ENSMUST00000104355 127 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm12993-201ENSMUST00000119900 479 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm5135-201ENSMUST00000121100 573 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Col8a1Q00780 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm24551-201ENSMUST00000158645 92 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm3025-201ENSMUST00000163454 489 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm3077-201ENSMUST00000165903 627 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm2878-201ENSMUST00000170173 486 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm4850-201ENSMUST00000185684 559 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm28356-202ENSMUST00000187566 858 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm42796-201ENSMUST00000199913 1087 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm9652-201ENSMUST00000209345 163 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm10043-201ENSMUST00000210691 235 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm7588-201ENSMUST00000216866 571 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 AC157654.1-201ENSMUST00000224130 820 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 AC154249.1-201ENSMUST00000226296 320 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Lias-201ENSMUST00000031101 2996 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Olfr120-201ENSMUST00000077498 993 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Mir455-201ENSMUST00000093594 82 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Stn1-207ENSMUST00000182808 1618 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Fignl1-206ENSMUST00000171080 2844 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm15533-202ENSMUST00000206216 3262 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC6.78□□□□□ -1.32
Col8a1Q00780 Gm35808-201ENSMUST00000204769 2602 ntBASIC6.78□□□□□ -1.32
Col8a1Q00780 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col8a1Q00780 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms