Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm12321-201ENSMUST00000121485 804 ntBASIC9.43□□□□□ -0.9
Msh6P54276 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.43□□□□□ -0.9
Msh6P54276 Gm43772-201ENSMUST00000202052 379 ntBASIC9.43□□□□□ -0.9
Msh6P54276 AC069561.1-201ENSMUST00000213750 424 ntBASIC9.43□□□□□ -0.9
Msh6P54276 Gm18789-201ENSMUST00000216115 550 ntBASIC9.43□□□□□ -0.9
Msh6P54276 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC9.43□□□□□ -0.9
Msh6P54276 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC9.43□□□□□ -0.9
Msh6P54276 Gm19217-201ENSMUST00000218238 328 ntBASIC9.43□□□□□ -0.9
Msh6P54276 CT025630.2-201ENSMUST00000228293 487 ntBASIC9.43□□□□□ -0.9
Msh6P54276 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC9.43□□□□□ -0.9
Msh6P54276 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Msh6P54276 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Msh6P54276 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Msh6P54276 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Msh6P54276 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC9.43□□□□□ -0.9
Msh6P54276 Gm44093-201ENSMUST00000204381 1802 ntBASIC9.43□□□□□ -0.9
Msh6P54276 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Msh6P54276 Gm42648-201ENSMUST00000200774 2505 ntBASIC9.43□□□□□ -0.9
Msh6P54276 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC9.42□□□□□ -0.9
Msh6P54276 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 CT025639.1-201ENSMUST00000223906 1375 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Gm45767-201ENSMUST00000212778 4561 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.42□□□□□ -0.9
Msh6P54276 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Gm11858-201ENSMUST00000117935 838 ntBASIC9.42□□□□□ -0.9
Msh6P54276 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC9.42□□□□□ -0.9
Msh6P54276 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.42□□□□□ -0.9
Msh6P54276 Mir1930-201ENSMUST00000158799 84 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Gm3208-201ENSMUST00000168281 427 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Gm20702-201ENSMUST00000176181 460 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Mir6241-201ENSMUST00000184225 103 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC9.42□□□□□ -0.9
Msh6P54276 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC9.42□□□□□ -0.9
Msh6P54276 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC9.42□□□□□ -0.9
Msh6P54276 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 n-R5s60-201ENSMUST00000083299 119 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC9.42□□□□□ -0.9
Msh6P54276 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Msh6P54276 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC9.42□□□□□ -0.9
Msh6P54276 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Msh6P54276 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC9.42□□□□□ -0.9
Msh6P54276 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.42□□□□□ -0.9
Msh6P54276 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC9.42□□□□□ -0.9
Msh6P54276 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.42□□□□□ -0.9
Msh6P54276 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Msh6P54276 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Gm19028-201ENSMUST00000189614 1873 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Msh6P54276 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Msh6P54276 Gm6142-201ENSMUST00000120290 325 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Gm13282-201ENSMUST00000121577 545 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC9.41□□□□□ -0.9
Msh6P54276 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC9.41□□□□□ -0.9
Msh6P54276 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC9.41□□□□□ -0.9
Msh6P54276 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC9.41□□□□□ -0.9
Msh6P54276 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Msh6P54276 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC9.41□□□□□ -0.9
Msh6P54276 Gm5261-201ENSMUST00000185860 713 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Gm29464-201ENSMUST00000187692 513 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Gm18995-201ENSMUST00000202981 520 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Gm43926-201ENSMUST00000203978 430 ntBASIC9.41□□□□□ -0.9
Msh6P54276 Gm17834-201ENSMUST00000204322 891 ntBASIC9.41□□□□□ -0.9
Msh6P54276 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC9.41□□□□□ -0.9
Msh6P54276 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC9.41□□□□□ -0.9
Msh6P54276 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC9.41□□□□□ -0.9
Msh6P54276 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 AV026068-219ENSMUST00000224148 933 ntBASIC9.41□□□□□ -0.9
Msh6P54276 CT030238.3-201ENSMUST00000227352 875 ntBASIC9.41□□□□□ -0.9
Msh6P54276 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC9.41□□□□□ -0.9
Msh6P54276 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Msh6P54276 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC9.41□□□□□ -0.9
Msh6P54276 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Msh6P54276 Gm12346-201ENSMUST00000121455 2255 ntBASIC9.41□□□□□ -0.9
Msh6P54276 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Msh6P54276 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms