Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm28751-201ENSMUST00000189287 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm29559-201ENSMUST00000189412 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28272-201ENSMUST00000189512 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28483-201ENSMUST00000189519 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28123-201ENSMUST00000189725 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28368-201ENSMUST00000189804 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm29119-201ENSMUST00000189973 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28716-201ENSMUST00000190217 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm29239-201ENSMUST00000190304 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28837-201ENSMUST00000190397 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28968-201ENSMUST00000190413 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28531-201ENSMUST00000190529 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm28165-201ENSMUST00000190669 694 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm29181-201ENSMUST00000191288 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC11.29□□□□□ -0.6
Cux1P53564 Gm38229-201ENSMUST00000191931 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm37669-201ENSMUST00000192184 820 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm38068-201ENSMUST00000192546 540 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm32347-201ENSMUST00000192944 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm38121-201ENSMUST00000193213 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm38035-201ENSMUST00000194427 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm38350-201ENSMUST00000194789 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm37990-201ENSMUST00000195821 696 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm44374-201ENSMUST00000199821 140 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Gm44902-201ENSMUST00000206177 805 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cux1P53564 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC11.29□□□□□ -0.6
Cux1P53564 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cux1P53564 Gm10126-201ENSMUST00000221732 168 ntBASIC11.29□□□□□ -0.6
Cux1P53564 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cux1P53564 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cux1P53564 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cux1P53564 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cux1P53564 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cux1P53564 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cux1P53564 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC11.28□□□□□ -0.6
Cux1P53564 Gm30517-201ENSMUST00000197350 772 ntBASIC11.28□□□□□ -0.6
Cux1P53564 Gm45394-201ENSMUST00000209240 1175 ntBASIC11.28□□□□□ -0.6
Cux1P53564 AC124184.1-201ENSMUST00000218167 283 ntBASIC11.28□□□□□ -0.6
Cux1P53564 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 AC174082.2-201ENSMUST00000222094 543 ntBASIC11.28□□□□□ -0.6
Cux1P53564 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cux1P53564 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Gm37043-201ENSMUST00000194609 3105 ntBASIC11.28□□□□□ -0.6
Cux1P53564 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cux1P53564 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cux1P53564 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cux1P53564 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cux1P53564 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cux1P53564 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cux1P53564 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cux1P53564 Gm8728-201ENSMUST00000207367 2178 ntBASIC11.27□□□□□ -0.6
Cux1P53564 Gm8486-201ENSMUST00000207508 2171 ntBASIC11.27□□□□□ -0.6
Cux1P53564 Gm8685-201ENSMUST00000207567 2183 ntBASIC11.27□□□□□ -0.6
Cux1P53564 Gm16443-201ENSMUST00000207909 2184 ntBASIC11.27□□□□□ -0.6
Cux1P53564 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cux1P53564 Gm37465-201ENSMUST00000192845 3290 ntBASIC11.27□□□□□ -0.61
Cux1P53564 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC11.27□□□□□ -0.61
Cux1P53564 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cux1P53564 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cux1P53564 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cux1P53564 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC11.27□□□□□ -0.61
Cux1P53564 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC11.27□□□□□ -0.61
Cux1P53564 Gm11343-201ENSMUST00000120579 599 ntBASIC11.27□□□□□ -0.61
Cux1P53564 Gm15349-201ENSMUST00000121154 204 ntBASIC11.27□□□□□ -0.61
Cux1P53564 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cux1P53564 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC11.27□□□□□ -0.61
Cux1P53564 Gm8245-201ENSMUST00000182434 987 ntBASIC11.27□□□□□ -0.61
Cux1P53564 Gm28377-201ENSMUST00000189695 720 ntBASIC11.27□□□□□ -0.61
Cux1P53564 Gm37191-201ENSMUST00000193346 388 ntBASIC11.27□□□□□ -0.61
Cux1P53564 AC122844.1-201ENSMUST00000195971 107 ntBASIC11.27□□□□□ -0.61
Cux1P53564 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC11.27□□□□□ -0.61
Cux1P53564 AC151730.1-201ENSMUST00000226106 448 ntBASIC11.27□□□□□ -0.61
Cux1P53564 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cux1P53564 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cux1P53564 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cux1P53564 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms