Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm12634-201ENSMUST00000122157 992 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Gm13828-201ENSMUST00000122278 363 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm17129-201ENSMUST00000168168 505 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Rfx3P48381 Mir7011-201ENSMUST00000183768 73 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Mir6340-201ENSMUST00000183857 119 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Gm43815-201ENSMUST00000197676 990 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Gm40319-201ENSMUST00000199785 481 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm5948-201ENSMUST00000219627 839 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Vmn1r41-204ENSMUST00000227039 985 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Rfx3P48381 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Rfx3P48381 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Rfx3P48381 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.69□□□□□ -1.34
Rfx3P48381 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Rfx3P48381 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Rfx3P48381 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.68□□□□□ -1.34
Rfx3P48381 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Rfx3P48381 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Gm11416-201ENSMUST00000119111 863 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Gm12123-201ENSMUST00000120348 472 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm17097-201ENSMUST00000166414 714 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Rfx3P48381 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC6.68□□□□□ -1.34
Rfx3P48381 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm18699-201ENSMUST00000190713 243 ntBASIC6.68□□□□□ -1.34
Rfx3P48381 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.68□□□□□ -1.34
Rfx3P48381 Gm37469-201ENSMUST00000193728 890 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms