Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm25379-201ENSMUST00000104338 114 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm22024-201ENSMUST00000122733 287 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm2709-201ENSMUST00000142979 350 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm24682-201ENSMUST00000158764 137 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Mir8120-201ENSMUST00000185035 139 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm24826-202ENSMUST00000197298 216 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm2840-201ENSMUST00000048361 411 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm12710-201ENSMUST00000119011 216 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm15188-201ENSMUST00000121264 704 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm26046-201ENSMUST00000157312 166 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Mir6241-201ENSMUST00000184225 103 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm43656-201ENSMUST00000197882 434 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Glycam1-204ENSMUST00000228895 641 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm10108-201ENSMUST00000078246 319 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm22774-201ENSMUST00000102084 109 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm22781-201ENSMUST00000104083 137 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm22728-201ENSMUST00000158087 129 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm37669-201ENSMUST00000192184 820 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm46424-201ENSMUST00000221567 168 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.19□□□□□ -1.1
Scn3aA2ASI5 Gm22748-201ENSMUST00000082493 136 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms