Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm11895-201ENSMUST00000122165 467 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm22562-201ENSMUST00000157334 111 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm23822-201ENSMUST00000158739 128 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm22408-201ENSMUST00000174925 65 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Mir6919-201ENSMUST00000185146 62 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm20587-201ENSMUST00000186367 1186 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm38164-201ENSMUST00000192810 330 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm37481-201ENSMUST00000195176 403 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm18995-201ENSMUST00000202981 520 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm33778-201ENSMUST00000216884 704 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm42648-201ENSMUST00000200774 2505 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Gm3550W4VSN7 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Gm3550W4VSN7 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Gm3550W4VSN7 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm5903-201ENSMUST00000121836 2325 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm16221-201ENSMUST00000117331 393 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm15079-201ENSMUST00000121943 216 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm16184-201ENSMUST00000162324 573 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm24576-201ENSMUST00000175508 248 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm4891-201ENSMUST00000182279 912 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm43542-201ENSMUST00000199505 379 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm40853-201ENSMUST00000221342 582 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm9255-201ENSMUST00000223225 581 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Gm16391-201ENSMUST00000086601 447 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Cmah-208ENSMUST00000224819 9482 ntBASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Gm3550W4VSN7 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Gm3550W4VSN7 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms