Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29143-201ENSMUST00000189462 201 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm4545-201ENSMUST00000190797 603 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm46317-201ENSMUST00000221103 393 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm13495-201ENSMUST00000121156 537 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm23164-201ENSMUST00000175084 111 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm27595-201ENSMUST00000184579 112 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm37392-201ENSMUST00000192098 516 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm5815-201ENSMUST00000050706 1185 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim3Q9R1R2 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim3Q9R1R2 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.03□□□□□ -1.28
Trim3Q9R1R2 Gm45084-201ENSMUST00000207096 1957 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms