Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Olfr353-202ENSMUST00000215925 1615 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm38249-201ENSMUST00000192560 2321 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 AC126028.1-201ENSMUST00000226218 2123 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm17821-201ENSMUST00000223448 1693 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm8688-201ENSMUST00000118240 969 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm12098-201ENSMUST00000118277 508 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm14836-201ENSMUST00000118567 471 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm13359-201ENSMUST00000119000 695 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm6798-201ENSMUST00000119961 360 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm12599-201ENSMUST00000120534 792 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm15928-201ENSMUST00000122455 280 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm6689-201ENSMUST00000130905 481 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm26351-201ENSMUST00000157532 232 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm17205-201ENSMUST00000168370 1207 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm20871-201ENSMUST00000191322 931 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm8826-201ENSMUST00000193161 948 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm34015-201ENSMUST00000194908 451 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm42472-201ENSMUST00000201626 859 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm43580-201ENSMUST00000202892 284 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm9354-201ENSMUST00000209075 468 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 AL772265.1-201ENSMUST00000214379 305 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 AL844586.1-201ENSMUST00000224297 1042 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 AC116395.1-201ENSMUST00000225480 1143 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Grip1-213ENSMUST00000147454 4520 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm18289-201ENSMUST00000203356 2989 ntBASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ube3bQ9ES34 Gm38352-201ENSMUST00000194459 2557 ntBASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Gm37518-201ENSMUST00000194930 2603 ntBASIC9.71□□□□□ -0.85
Ube3bQ9ES34 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms