Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Fbxo3-203ENSMUST00000111135 3740 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gsdma2-202ENSMUST00000093938 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Sdr16c5-201ENSMUST00000040925 1385 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm8569-201ENSMUST00000117630 647 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm12402-201ENSMUST00000120536 334 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm22481-201ENSMUST00000122562 192 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm16548-201ENSMUST00000133341 1226 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Nip7-202ENSMUST00000170962 606 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Olfr126-201ENSMUST00000174139 960 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm26726-201ENSMUST00000181889 395 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm27225-201ENSMUST00000183833 557 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm28724-201ENSMUST00000186149 625 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm5190-201ENSMUST00000192434 357 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm37491-201ENSMUST00000192552 1111 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm7270-202ENSMUST00000195850 1131 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm42441-201ENSMUST00000199778 748 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm46191-201ENSMUST00000218899 433 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 AC133183.2-201ENSMUST00000221543 280 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 AC163621.2-201ENSMUST00000222229 682 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 AC123534.1-201ENSMUST00000224060 656 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 AC163638.1-201ENSMUST00000224818 392 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm15500-201ENSMUST00000071523 894 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm22977-201ENSMUST00000082615 107 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Mir181c-201ENSMUST00000083549 89 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm10272-201ENSMUST00000092371 350 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Gm45292-201ENSMUST00000211232 2207 ntBASIC8.15□□□□□ -1.1
Trim42Q9D2H5 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim42Q9D2H5 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Trim42Q9D2H5 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim42Q9D2H5 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.15□□□□□ -1.11
Trim42Q9D2H5 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Trim42Q9D2H5 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Trim42Q9D2H5 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.15□□□□□ -1.11
Trim42Q9D2H5 AC153862.1-201ENSMUST00000215700 3349 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Psg19-203ENSMUST00000182853 1518 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 BC085271-201ENSMUST00000191852 1487 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm45204-201ENSMUST00000206297 1354 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 AC162467.2-201ENSMUST00000219397 2571 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm26377-201ENSMUST00000102184 108 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm25763-201ENSMUST00000104099 129 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm26429-201ENSMUST00000104829 110 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm12874-201ENSMUST00000117190 913 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm11433-201ENSMUST00000118318 228 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Defa-ps13-201ENSMUST00000120695 204 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 n-R5s23-201ENSMUST00000122523 115 ntBASIC8.14□□□□□ -1.11
Trim42Q9D2H5 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms