Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm12773-201ENSMUST00000120134 587 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm18191-201ENSMUST00000174624 824 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm28720-201ENSMUST00000190728 3156 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Smc1aQ9CU62 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm22022-201ENSMUST00000104355 127 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm13858-201ENSMUST00000118862 671 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm27782-201ENSMUST00000185059 199 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm7560-201ENSMUST00000187748 873 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm43590-201ENSMUST00000195987 387 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm45900-201ENSMUST00000211879 409 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Olfr120-201ENSMUST00000077498 993 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Smc1aQ9CU62 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Smc1aQ9CU62 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms