Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm12713-201ENSMUST00000118404 764 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm13341-201ENSMUST00000120780 672 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm16357-201ENSMUST00000144091 474 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Mir6357-201ENSMUST00000184246 104 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm37139-201ENSMUST00000192134 4419 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm18655-201ENSMUST00000214802 1090 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 AC122372.1-201ENSMUST00000215344 280 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 CU024892.1-201ENSMUST00000224869 515 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 n-R5s29-201ENSMUST00000082836 119 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm42678-201ENSMUST00000197163 2221 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm38352-201ENSMUST00000194459 2557 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.52□□□□□ -0.89
RtcbQ99LF4 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
RtcbQ99LF4 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 AC154747.4-203ENSMUST00000225893 1384 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm16536-201ENSMUST00000162209 1589 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm12635-201ENSMUST00000117285 752 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm13678-201ENSMUST00000118926 340 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm12174-201ENSMUST00000119853 813 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm8550-201ENSMUST00000161621 653 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm27218-201ENSMUST00000183745 392 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm38200-201ENSMUST00000192083 2111 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Ighv8-1-201ENSMUST00000194897 291 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm44656-201ENSMUST00000208428 490 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm20586-201ENSMUST00000210122 547 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm19169-201ENSMUST00000220109 1246 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 AC069562.1-201ENSMUST00000224206 434 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm42519-201ENSMUST00000199282 3656 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.51□□□□□ -0.89
RtcbQ99LF4 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
RtcbQ99LF4 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms